![]() ![]() R is a collaborative project with many contributors. Natural language support but running in an English locale Type 'license()' or 'licence()' for distribution details. You are welcome to redistribute it under certain conditions. R is free software and comes with ABSOLUTELY NO WARRANTY. bin/RĬopyright (C) 2014 The R Foundation for Statistical Computing This file "libgfortran.so.1" is located in "/home/youri/galaxy/tool-dependencies/R/3.1.0/iuc/package_r_3_1_0/a6cc7706ea14/lib" home/youri/galaxy/tool-dependencies/R/3.1.0/iuc/package_r_3_1_0/a6cc7706ea14/lib/R/bin/exec/R: error while loading shared libraries: libgfortran.so.1: cannot open shared object file: No such file or directory On my 14.04.01 LTS Desktop instance I get another error related to the missing libgfortran.so.1: TCL_LIBRARY=./R/3.1.0/iuc/package_r_3_1_0/a6cc7706ea14/lib/libtcl8.4.so export TCL_LIBRARY On a ubuntu server (12.04.04 LTS) I get the following error: /home/galaxy/galaxy/galaxy-dist/toolsheddependencies/R/3.1.0/iuc/package_r_3_1_0/a6cc7706ea14/lib/R/bin/exec/R: error while loading shared libraries: libgfortran.so.1: cannot open shared object file: No such file or directory PDF/SVG to PNG? I think this is awckward since R should be the perfect tool to produce PNG figures. Or would somebody recommend to use a non-R program to convert from e.g. So, what would be the best way to create a PNG figure from my plot(s) within an R instance from a toolshed?ĭoes it require R to be compiled with X11 or are there ways to overcome this (I am not sure but I thought I read something about Cairo)? However, the repository requires several other dependencies which are not programmed within the installer: libx11-dev libxt-dev (and some more, because after all it still work out). I also tried another solution installation of R with X from the following repository. How I interpret this is that in order to produce PNG's, R needs to be compiled with the X11 library.īecause the installer from the toolshed uses the compilation argument " -without-x", it doesn't compile with X11 and so it is not possible to produce PNGs, correct? Unable to open connection to X11 display '' In png(output_PValue_distribution_plot) : R crashes with the following error: Error in. When I run R code of the following structure: png(output_PValue_distribution_plot) ![]() This problem is probably related to the following issue: I'm encountering problems when I want to export a plot from R into a PNG, using several R packages from the toolshed(s). ![]()
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